Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915630.1_cds_XP_016465411.1_58367
CDS Infomation

[gene=LOC107788253] [db_xref=GeneID:107788253] [protein=GPI transamidase component PIG-T-like] [protein_id=XP_016465411.1] [location=complement(join(4287..4465,5148..5328,5408..5557,6166..7419,8133..8354))] [gbkey=CDS]
Sequence

ATGGTTCGATTAAGATCAATTTTGCTATTTATTCTGCTCTTTAAGAGCTTCGGGTCTATT
ATTATTGCCGAACAAAGTGAAGAAGAGTTCTCAGAAGCACTGTTGTTGAGGCCATTACCA
GATCGTAAAGTGTTGGCGCATTTTCACTTCGAAAGTAAAATCCCCCCAACTCGCACTCAT
GGCCCCCACCACAGTCTCTTCCCCAAATCCATTTATCAGCTGGTTCATAAATTTAGAGTT
CGAGAAATGGAGCTGTCCTTCACACAAGGTCGCTGGAATTATGGACGCTGGGGTGGATAC
GACCCCATTTCAAGTAGAAATGCGAAACCACCTGGAGTTGAACTGTGGGCTACTTTTGAT
GTTCCACAACATCAGGTCGACGCTTCTTGGAGAAATTTAACCCATGCTCTTTCAGGGCTC
TTTTGTGCTTCCATTAACTTCCTAGAGTCATCAACTGCATATTCTGCTCCTCAGTGGAGC
TTCAAGTCATTTGCTACAAATGTCAGGTACGGCACATTGCCCCGTGAGGCTGTTTGCACA
GAGAACCTCACTCCATGGCTAAAGTTGCTTCCTTGCCGAGACAAAGCTGGGCTTTCTGCA
TTGATGGACAGACCTTCTATCTACCGAGGATTTTATCACTCTCAGAGATTGCATTTGGTC
TCGAATGAATTTGATCTAGCTGAAGCAAGTTCCGGAATGGTGCTTGAACAGACACTTACC
GTTGTTCTTCAACCGGTTACTTTAGGAAGTGGCATGACATCATCTGTTGGCTCAATACGA
CAGCCAAGTTGGTCATTGAGCTCGTTGTTTGGACGAAAAGTTAGTGGAAGGTGTGTTCTT
TCAAATACTAGTAATGTGTATGTCCAATTAGAGCCAAATTTGGTGTCAGAGTTGAAGAGT
ACTTCAGAGATGCAACAAGAATCTGATGTTAAGAATTTGATATCTCAAGCTTGGAGTGAC
ATGAGCTTTGAAATGTCTGATTCCCCAGTTAGGGTAGTTAAAGAAGTTTATGGCTTTCAC
AAGGAGTCATCCCTTCTATATGAATATTCTCTAGCAAATAGCAGTGATTCAAGGCCATTT
GACTTGGAGTTCAGGTGGAAGCGTCCCGTGACTTGGTCATCTCAACTGGCACCTTATCAG
GCTAGCAGGTTCCTTATGGGAAGTGGGAATGAAAGGGGTGCAATAGCCATCTCCTTGAAA
TCTGTAGGAAGAAGTGAGTATACCGATTCTTCTGAAGATGAGGAAGGAAGATGCTCGTTA
CGCGTTGATGTGTTCCAAGTTGTGCCTTGGTATGTCAAGGTTTATTTCCACACGCTCAAA
GTGTATCTGGATGAACGTCTGCATAGTTTAGCAGATGTCGTAGAAAGGACAAATGTCTCG
CCTTCTGAAGACAAGGTTTCTCCTGGGCTAATGGAAATAGCATTGCGATTTCCCTGTGAT
GTGAACTCGGTGATATTGACATTGGAGTTTGATAAGGGTTTTCTTCACATCGATGAGTAT
CCTCCAGATGCTAATCAGGGTTTTGACATTCCATCAGCTTTAATCAGGTTTCCCGAGATC
AAAACAAAGCTGCATTTATTTGAGGATAAATCTGCTTGCAAGTCACCTCTCATATCCAAG
CTACAGGAAGAAAGCCCTGTTCTATGGTACACAGAAGTATTGCTTGTACCCTTGACCACT
CCTGATTTTAGCATGCCATACAATGTCATCACAATTACATGCACTGTATTTGCTCTATAT
TTTGGATCACTTCTTAATGCGTTACGTAGGCGTGTCGAAGAGGAGGAGAGGCTTCTGAAA
AGTAAAGCTACCAAGGACAGTGGTCCAATAGGCGTGCTATTGTCCAAACTATCAGCTAAA
TTGAGGGGAAAACCGCTGGAACCACCGAAATCGTCCACATTGTCATCATCAAAAGTCAGT
TATAAGCTGATTCTCAGAGTGATACTGGTGGCGGGTATTGCTGCTGCTTGGCAGTACTTT
GGATAA

Peptide Sequence

PEP ID

XP_016465411.1
PEP Infomation

PREDICTED: GPI transamidase component PIG-T-like [Nicotiana tabacum]
Sequence

MVRLRSILLFILLFKSFGSIIIAEQSEEEFSEALLLRPLPDRKVLAHFHFESKIPPTRTH
GPHHSLFPKSIYQLVHKFRVREMELSFTQGRWNYGRWGGYDPISSRNAKPPGVELWATFD
VPQHQVDASWRNLTHALSGLFCASINFLESSTAYSAPQWSFKSFATNVRYGTLPREAVCT
ENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLHLVSNEFDLAEASSGMVLEQTLT
VVLQPVTLGSGMTSSVGSIRQPSWSLSSLFGRKVSGRCVLSNTSNVYVQLEPNLVSELKS
TSEMQQESDVKNLISQAWSDMSFEMSDSPVRVVKEVYGFHKESSLLYEYSLANSSDSRPF
DLEFRWKRPVTWSSQLAPYQASRFLMGSGNERGAIAISLKSVGRSEYTDSSEDEEGRCSL
RVDVFQVVPWYVKVYFHTLKVYLDERLHSLADVVERTNVSPSEDKVSPGLMEIALRFPCD
VNSVILTLEFDKGFLHIDEYPPDANQGFDIPSALIRFPEIKTKLHLFEDKSACKSPLISK
LQEESPVLWYTEVLLVPLTTPDFSMPYNVITITCTVFALYFGSLLNALRRRVEEEERLLK
SKATKDSGPIGVLLSKLSAKLRGKPLEPPKSSTLSSSKVSYKLILRVILVAGIAAAWQYF
G

Transcript Sequence

Gene sequence data has not been registered.